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Evolutionary Informatics

1Life621/Life721. Evolutionary Informatics – Estimating sitesundergoing positive selectionSeth Barribeau (sethb@liv.ac.uk)There are a variety of software packages which look for evidence of selection in orthologousgene sequence. We are going to use the Datamonkey web interface(http:www.datamonkey.org) which runs the HyPhy package (which one can download forstandalone use but installation is nontrivial).These tools can do a number of […]

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DNA sequences using Datamonkey

Detecting signatures of selection fromDNA sequences using DatamonkeyArt F.Y. Poon, Simon D.W. Frost and Sergei L. Kosakovsky Pond*Antiviral Research Center, Department of Pathology, University of California San Diego, La Jolla, California, USA*Corresponding AuthorSergei L Kosakovsky Pond, PhDAssistant Project ScientistDepartment of Pathology,Antiviral Research Center150 W. Washington St., #100San Diego, CA 92103-2005Phone: 619-543-8899E-mail: spond@ucsd.eduKeywords: Positive selection, adaptive

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activities in the network

1. Compute the early, late, and slack times for the activities in the network that follows, assuminga time-constrained network. Which activities are critical? What is the time-constrained projectduration?Note: Recall, in the schedule resource load chart the time-constrained scheduling interval (ESthrough LF) has been shaded. Any resource scheduled beyond the shaded area will delay theproject.Assume you

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Bottom-up design

12http://pinoytutorial.com/techtorial/idvm-digital-multimeter-review-price-and-features-for-iphone-voltmeter/http://www.wired.com/2011/04/iscilloscope-300-kit-turns-ipad-iphone-into-multitouch-oscilloscope/ 3 Issues: Box too big, box too costly, users want the iPhone appto be more user friendly. Next Generation DMM measures volts (AC/DC), ohms, current(AC/DC). Users want more functionality: scope, and to useother functionality of the iPhone, such as email, etc. Solution should sell for approx. $200 USD. Your solution goes here! Class exercise

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ESCI 2000ID Energy Resources: Climate Act Review

Detailed Instructions Download |  This semester you were exposed to the various energy resources that are available to humans for heating, producing hot water, generating electricity, and powering vehicles, all critical aspects of our daily lives.  We also learned about the carbon cycle and how fossil fuels (coal, oil, natural gas) have been the world’s “go-to”

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Elevator Pitch Presentation: Plausible and Scalable Idea

Detailed Instructions Download |  Choosing from one of the future directions of apparel studied in this course; create your own ORIGINAL idea for an apparel company or product. Focus on one of the following: sustainability, biosynthetic, or smart textiles/clothing, and create a pitch for a capital investor. You are the “idea” person conceptualizing the product, so

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Quantitative Problem-solving Strategies: Informing Personal Decisions

Detailed Instructions Download |  Throughout this course, you have learned how to apply quantitative reasoning and problem-solving strategies to a variety of staged, but real-world contexts. You have built upon the skills you already had to advance the range of contexts to which you can apply mathematical thinking and problem-solving strategies effectively. Your final project for

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Request for Proposal Response: Informal Analytical Report

Detailed Instructions Download |  Write a 1000 to 1250 word informal(no cover page, table of contents, or appendices) analytical report(recommendation or yardstick), supported by reliable evidence (e.g., peer-reviewed journal articles, book chapters from academic book publishers, government or institutional websites, reputable newspapers or magazines, etc.) from at least four resources, with reasonable conclusions and recommendations. Reports

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